BATCHIE
=======

Welcome to the documentation for the Python implementation of BATCHIE

If you use BATCHIE please cite our `preprint <https://www.biorxiv.org/content/10.1101/2023.12.18.572245v2>`_:

.. code-block::

    A Bayesian active learning platform for scalable combination drug screens
    Christopher Tosh, Mauricio Tec, Jessica White, Jeffrey F Quinn, Glorymar Ibanez Sanchez, Paul Calder, Andrew L Kung, Filemon S Dela Cruz, Wesley Tansey
    bioRxiv 2023.12.18.572245; doi: https://doi.org/10.1101/2023.12.18.572245


Contents
========

.. toctree::
    :maxdepth: 2

    install
    quickstart
    data_format
    output_format
    running
    configuration
    extension
    retrospective_experiments
    command_line_interface
    api



Indices and tables
==================

* :ref:`genindex`
* :ref:`modindex`
* :ref:`search`